CDS

Accession Number TCMCG057C43224
gbkey CDS
Protein Id XP_018451073.1
Location join(2577439..2577552,2577648..2577716,2577789..2577916,2577992..2578091,2578253..2578320,2578501..2578642,2578748..2578864,2579019..2579144,2579226..2579309,2579407..2579486,2579562..2579664)
Gene LOC108822479
GeneID 108822479
Organism Raphanus sativus

Protein

Length 376aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018595571.1
Definition PREDICTED: V-type proton ATPase subunit C-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category C
Description Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells
KEGG_TC 3.A.2.2
KEGG_Module M00160        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
KEGG_ko ko:K02148        [VIEW IN KEGG]
EC -
KEGG_Pathway ko00190        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko04145        [VIEW IN KEGG]
ko04150        [VIEW IN KEGG]
ko04721        [VIEW IN KEGG]
ko04966        [VIEW IN KEGG]
ko05110        [VIEW IN KEGG]
ko05120        [VIEW IN KEGG]
ko05323        [VIEW IN KEGG]
map00190        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map04145        [VIEW IN KEGG]
map04150        [VIEW IN KEGG]
map04721        [VIEW IN KEGG]
map04966        [VIEW IN KEGG]
map05110        [VIEW IN KEGG]
map05120        [VIEW IN KEGG]
map05323        [VIEW IN KEGG]
GOs GO:0000221        [VIEW IN EMBL-EBI]
GO:0000325        [VIEW IN EMBL-EBI]
GO:0000902        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006811        [VIEW IN EMBL-EBI]
GO:0006812        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008324        [VIEW IN EMBL-EBI]
GO:0008553        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009826        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015075        [VIEW IN EMBL-EBI]
GO:0015077        [VIEW IN EMBL-EBI]
GO:0015078        [VIEW IN EMBL-EBI]
GO:0015318        [VIEW IN EMBL-EBI]
GO:0015399        [VIEW IN EMBL-EBI]
GO:0015405        [VIEW IN EMBL-EBI]
GO:0015662        [VIEW IN EMBL-EBI]
GO:0015672        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016469        [VIEW IN EMBL-EBI]
GO:0016471        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019829        [VIEW IN EMBL-EBI]
GO:0022804        [VIEW IN EMBL-EBI]
GO:0022853        [VIEW IN EMBL-EBI]
GO:0022857        [VIEW IN EMBL-EBI]
GO:0022890        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033176        [VIEW IN EMBL-EBI]
GO:0033178        [VIEW IN EMBL-EBI]
GO:0033180        [VIEW IN EMBL-EBI]
GO:0034220        [VIEW IN EMBL-EBI]
GO:0036442        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0042625        [VIEW IN EMBL-EBI]
GO:0042626        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043492        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090662        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098655        [VIEW IN EMBL-EBI]
GO:0098660        [VIEW IN EMBL-EBI]
GO:0098662        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0099131        [VIEW IN EMBL-EBI]
GO:0099132        [VIEW IN EMBL-EBI]
GO:1902600        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACTTCGAGGTACTGGGTGGTGTCTCTACCAGTGAAGGACTCTTCTTCCACCTCGTGGAATCGTCTTCAAGAGCAGATCTCCAAGCATTCCTTTGATACTCCTCTTTATCGGTTCAACATCCCTAATCTTCGTGTTGGAACCTTAGATTCTCTTCTCGCACTCGGCGATGATCTTCTCAAGTCGAATAGCTTTGTGGAAGGAGTTTCTCAGAAGATCAGGAGACAGATCGAGGAGCTGGAGAGGATTTCTGGTGTTGAGAGCAATGCTCTTACTGTTGATGGAGTTCCTGTTGACTCTTATCTCACCAGGTTTGTGTGGGATGAAGCTAAGTACCCAACAATGTCACCTTTGAAGGAGGTTGTGGAGAATATTCAGTCTCAGGTTGCCAAGATTGAAGATGATCTCAAGGTTCGTGTCGCTGAGTATAACAATGTCCGCGGTCAACTCAATGCCATTAACCGAAAGCAGAGTGGAAGCTTAGCTGTTCGTGACCTCTCAAACTTGGTTAAGCCAGAAGATATTGTTGCGTCAGAACATCTCGTGACTCTCCTTGCTGTTGTTCCAAAGTACTCCCAGAAAGACTGGCTAGCATGTTATGAGACATTAACCGAATATGTGGTTCCTAGGTCCTCGAAGAAATTGTTTGAGGATAATGAGTATGCTCTTTACACCGTCACTCTCTTTACTCGTGTTGCGGACAATTTCAGGACAAGTGCTCGTGAGAAAGGATTCCAAGTCCGTGATTTTGAACATAGCGTTGAAGCACAAGAGACTCGTAAACAAGAGCTAGAAAAGTTGGTTCAGGATCAGGAAAGTTTGAGAACCTCTCTTTTGCAATGGTGCTACACCAGCTATGGAGAGGTTTTCAGCTCCTGGATGCATTTCTGTGCTGTGCGCATATTCGCTGAGAGCATTATGAGATATGGTTTACCTCCTGCGTTCTTGGCATGCGTCTTATCTCCGGCTGTGAAGAGTGAAAAGAAAGTGCGCTCCATTCTTGAACGCTTGTGTGATTCTACCAACAGTTTATACTGGAAAAGCGAGGAGGATGGAGGAGCTGCCATGGCTGGTTTAGCAGGTGACTCAGAGACACATCCTTATGTCTCCTTCACGATCAACCTTGCTTGA
Protein:  
MTSRYWVVSLPVKDSSSTSWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALGDDLLKSNSFVEGVSQKIRRQIEELERISGVESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLKEVVENIQSQVAKIEDDLKVRVAEYNNVRGQLNAINRKQSGSLAVRDLSNLVKPEDIVASEHLVTLLAVVPKYSQKDWLACYETLTEYVVPRSSKKLFEDNEYALYTVTLFTRVADNFRTSAREKGFQVRDFEHSVEAQETRKQELEKLVQDQESLRTSLLQWCYTSYGEVFSSWMHFCAVRIFAESIMRYGLPPAFLACVLSPAVKSEKKVRSILERLCDSTNSLYWKSEEDGGAAMAGLAGDSETHPYVSFTINLA